MKSNAD

NAME

mksnad - a

SYNOPSIS

mksnad -s script -dt arc

DESCRIPTION

T

EXAMPLES

d

C

FILES

mksnad makes use of the following temporary files:
DESX_FILE
SCRIPT_FILE

You . mksnad also produces the following files

bond.loop
angle.loop
itor.loop
noe.list

The first three are constraints for the loop regions. These must be manually attached to the main descriptor - be sure to update the bond, angle and improper torsion counts. The last file is generated if you have crosslink constraints.

SEE ALSO

T

DIAGNOSTICS

D

BUGS

B

NOTES

N

 


des format
arc format
yammp shell
exam commands
intro
arc
arcedit
arctransform
checkspider
des
elec2vlat

exam
mimesis
mkchainarc
mkchaindes
mkd3c
mkd3d
mkr2cc
mksnac
mksnad
xmd3
xmr2
ympf

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