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The Flying Ice Cube: Velocity Rescaling in Molecular Dynamics Leads to Violation of Energy Equipartition
S.C. Harvey, R.K.-Z. Tan & T.E. Cheatham III
J. Comput. Chem. 19. 726-740 (1998)

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To Knot or Not to Knot? Examination of 16S Ribosomal RNA Models
Margaret S. VanLoock, Brett A. Harris & Stephen C. Harvey
J. Biomol. Struct. Dyns., 16, 709-713 (1998)

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Major Groove Binding of the tRNA / mRNA Complex to the 16S Ribosomal RNA Decoding Site from Escherichia coli
M.S. VanLoock, T.R. Easterwood and S.C. Harvey
J. Mol. Biol., 285, 2067-2078 (1999)

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(PDB) 270014

Exploring Three-Dimensional Structures of the HIV-1 / tRNALys3 Initiation Complex
T. Elgavish, M.S. VanLoock and S.C. Harvey
J. Mol. Biol. 285, 449-453 (1999)

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Three-Dimensional Placement of the Conserved 530 Loop of 16S rRNA and of its Neighboring Components in the 30S Subunit
R. Wang, R.W. Alexander, M. VanLoock, S.Vladimirov, Y. Bukhtiyarov, S.C.Harvey and B.S. Cooperman
J. Mol. Biol. 286, 521-540 (1999)

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(PDB) 131359

Molecular Dynamics on a Model for Nascent High-Density Lipoprotein: Role of Salt Bridges
C. Sheldahl & S.C. Harvey
Biophys. J. 76, 1190-1198 (1999)

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Program for Analyzing Knots Represented by Polygonal Paths
Brett A. Harris & Stephen C. Harvey
J. Comp. Chem. 20, 813-818 (1999)

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(TAR/GZIP) 17624

Apoliproprotein A-I in Discoidal High Density Lipoprotein: A Detailed Molecular Belt Model
J.P. Segrest, M.K. Jones, A.E. Klon, C.J. Sheldahl, M. Hellinger, H. De Loof & S.C. Harvey
J. Biol. Chem. 274, 31755-31758 (1999)

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(PDB) 2183395
1/26/01

A Functional Interpretation of the Cryo-Electron Microscopy Map of the 30S Ribosomal Subunit from Escherichia coli,
M.S. VanLoock, A. Malhotra, D.A. Case, R. Agrawal, P. Penczek, T.R. Easterwood, J. Frank & S.C. Harvey
in The Ribosome: Structure, Function, Antibiotics, and Cellular Interactions (R.A. Garrett, S.R. Douthwaite, A. Liljas, A.T. Matheson, P.B. Moore & H.F. Noller, Eds., ASM Press, Washington, DC) 165-171 (2000)

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Molecular Belt Models for the Apolipoprotein A-I Paris and Milano Mutations
Anthony E. Klon, Martin K. Jones, Jere P. Segrest and Stephen C. Harvey
Biophys. J. 79, 1679-1685 (2000)

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RNA Scaffolds for Minihelix-Based Aminoacyl Transfer: Design of "Transpeptizymes"
N. Y. Sardesai, S. M. Stagg, M. S. VanLoock, S. C. Harvey and P. Schimmel
J. Biomolec. Struct. Dyns. Conversations 11, 29-38 (2000)

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Structure and Function of Apo A-I and HDL
J. P. Segrest, L. Li, G. M. Anantharamaiah, S. C. Harvey, K. N. Liadaki & V. Zannis
Curr. Opin. Lipidology 11, 105-115 (2000)

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Movement of the Decoding Region of the 16S Ribosomal RNA Accompanies tRNA Translocation
M. S. VanLoock, R. K. Agrawal, I. S. Gabashvili, L. Qi, J. Frank and S. C. Harvey
J. Mol. Biol. 304, 507-515 (2000)

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