Pre-accommodation (Kirromycin stalled):
Before optimization:
30S (2I2P_kirro_ssu_mRNA_tRNA.pdb)
50S (2I2V_kirro_lsu.pdb)
After optimization:
30S (30S_kirro.pdb)
50S (50S_kirro.pdb)
Post-accommodation:
Before optimization:
30S (2I2P_acco_ssu_mRNA_tRNA.pdb)
50S (2I2V_acco_lsu.pdb)
After optimization:
30S (30S_acco.pdb)
50S (50S_acco.pdb)
Optimized tRNAs and mRNA
Kirromycin stalled tRNAs (A/T, P, and E sites)
EF-Tu
Accommodated tRNA (A, P and E sites)