|
Any
AtomGroup
object can be printed. The output is one line per
object. When a Group is printed, the descendants of
this Group are also printed. The output for a large
hierarchy may be unmanageable.
The
output for an Atom node consists of:
|
{-}+{N}\t{1}:{2}\t{3}:{4}\t{5}:{6}\t{7}
|
|
{-}
|
a
number of dashes that is one less than
the level of this node in the
hierarchy
|
|
{N}
|
The
value of the
nodename
attribute
|
|
\t
|
Tab
|
|
{1}
|
The
value of the
atomindex
attribute
|
|
{2}
|
The
value of the
reference
attribute
|
|
{3}
|
The
value of the
mass
attribute
|
|
{4}
|
The
value of the
charge
attribute
|
|
{5}
|
The
value of the
atomitype
attribute
|
|
{6}
|
The
value of the
atomxtype
attribute
|
|
{7}
|
The
value of the
mask
attribute
|
The
numeric codes for the chemical state and atom class
(positive or zero) are printed if they had been
specified. Otherwise, -1 is printed if they have
not been specified or -2 if an illegal value had
been specified.
The
output for a Group node consists of:
|
{-}+{N}:\t/{1}:{2}\
|
|
{-}
|
a
number of dashes that is one less than
the level of this node in the
hierarchy
|
|
{N}
|
The
value of the
nodename
attribute
|
|
\t
|
Tab
|
|
{1}
|
The
value of the
firstatom
attribute
|
|
{2}
|
The
value of the
nextatom
attribute
|
|